Skip to content

feat(medcat): CPDT-283 Add spanish snomed preprocessing #669

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
mart-r wants to merge 3 commits into
base: main
Choose a base branch
from
Open

feat(medcat): CPDT-283 Add spanish snomed preprocessing #669

Changes from all commits
Commits
Show all changes
3 commits
Select commit Hold shift + click to select a range
63457e2
Add Spanish release support
mart-r Nov 10, 2026
3de2e19
Fix regex to support Spanish version
mart-r Nov 10, 2026
3f54d37
Fix relationship files
mart-r Nov 11, 2026
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
12 changes: 11 additions & 1 deletion medcat/medcat/model_creation/preprocess_snomed.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -124,7 +124,7 @@ class ExtensionDescription:

SNOMED_FOLDER_NAME_PATTERN = re.compile(
# within: EXTENSION PRODUCTION RELEASE
r"^SnomedCT_([A-Za-z0-9]+)_([A-Za-z0-9]+)_(\d{8}(?:T\d{6}Z)?)$")
r"^SnomedCT_([A-Za-z0-9-]+)_([A-Za-z0-9]+)_(\d{8}(?:T\d{6}Z)?)$")
PER_FILE_TYPE_PATHS = {
RefSetFileType.concept: os.path.join("Snapshot", "Terminology"),
RefSetFileType.description: os.path.join("Snapshot", "Terminology"),
Expand Down Expand Up @@ -185,6 +185,16 @@ class SupportedExtension(Enum):
refset=_IGNORE_TAG,
),
)
SPANISH = ExtensionDescription(
exp_name_in_folder="SpanishRelease-es",
exp_files=FileFormatDescriptor(
concept="Concept_SpanishExtensionSnapshot",
description="Description_SpanishExtensionSnapshot-es",
relationship="Relationship_SpanishExtensionSnapshot",
# NOTE: the below will be ignored for UK_CLIN bundle
refset="der2_iisssccRefset_ExtendedMapSpanishExtensionSnapshot"
),
)


@dataclass
Expand Down
Loading